From 85e0b5674bc449616e7bed0b8107d46d63d34e24 Mon Sep 17 00:00:00 2001
From: Marcel Kronfeld <makron@gmx.net>
Date: Mon, 4 Aug 2008 15:16:03 +0000
Subject: [PATCH] Moving des package to eva2.tools.des

---
 .../inference/metabolic/AbstractCurveFittingProblem.java        | 2 +-
 .../inference/metabolic/AbstractValineCurveFittingProblem.java  | 2 +-
 .../problems/inference/metabolic/odes/AbstractValineSystem.java | 2 +-
 .../{server/go/problems/inference => tools}/des/DESSolver.java  | 2 +-
 .../{server/go/problems/inference => tools}/des/DESystem.java   | 2 +-
 .../{server/go/problems/inference => tools}/des/RKSolver.java   | 2 +-
 6 files changed, 6 insertions(+), 6 deletions(-)
 rename src/eva2/{server/go/problems/inference => tools}/des/DESSolver.java (96%)
 rename src/eva2/{server/go/problems/inference => tools}/des/DESystem.java (95%)
 rename src/eva2/{server/go/problems/inference => tools}/des/RKSolver.java (99%)

diff --git a/src/eva2/server/go/problems/inference/metabolic/AbstractCurveFittingProblem.java b/src/eva2/server/go/problems/inference/metabolic/AbstractCurveFittingProblem.java
index 1f904568..4aea0551 100644
--- a/src/eva2/server/go/problems/inference/metabolic/AbstractCurveFittingProblem.java
+++ b/src/eva2/server/go/problems/inference/metabolic/AbstractCurveFittingProblem.java
@@ -8,8 +8,8 @@ import eva2.server.go.individuals.ESIndividualDoubleData;
 import eva2.server.go.individuals.InterfaceDataTypeDouble;
 import eva2.server.go.problems.AbstractOptimizationProblem;
 import eva2.server.go.problems.InterfaceHasInitRange;
-import eva2.server.go.problems.inference.des.RKSolver;
 import eva2.tools.Mathematics;
+import eva2.tools.des.RKSolver;
 
 /**
  * This class provides a collection of methods to compare two curves one against
diff --git a/src/eva2/server/go/problems/inference/metabolic/AbstractValineCurveFittingProblem.java b/src/eva2/server/go/problems/inference/metabolic/AbstractValineCurveFittingProblem.java
index 35fe380f..d7fc6209 100644
--- a/src/eva2/server/go/problems/inference/metabolic/AbstractValineCurveFittingProblem.java
+++ b/src/eva2/server/go/problems/inference/metabolic/AbstractValineCurveFittingProblem.java
@@ -8,8 +8,8 @@ import eva2.server.go.individuals.AbstractEAIndividual;
 import eva2.server.go.individuals.ESIndividualDoubleData;
 import eva2.server.go.individuals.InterfaceDataTypeDouble;
 import eva2.server.go.populations.Population;
-import eva2.server.go.problems.inference.des.RKSolver;
 import eva2.server.go.problems.inference.metabolic.odes.AbstractValineSystem;
+import eva2.tools.des.RKSolver;
 
 /**
  * Super class for many simulation problems of the valine and leucine reaction
diff --git a/src/eva2/server/go/problems/inference/metabolic/odes/AbstractValineSystem.java b/src/eva2/server/go/problems/inference/metabolic/odes/AbstractValineSystem.java
index 7944f465..62817b65 100644
--- a/src/eva2/server/go/problems/inference/metabolic/odes/AbstractValineSystem.java
+++ b/src/eva2/server/go/problems/inference/metabolic/odes/AbstractValineSystem.java
@@ -1,6 +1,6 @@
 package eva2.server.go.problems.inference.metabolic.odes;
 
-import eva2.server.go.problems.inference.des.DESystem;
+import eva2.tools.des.DESystem;
 
 /**
  * This class contains the necessary splines for selected metabolites of the
diff --git a/src/eva2/server/go/problems/inference/des/DESSolver.java b/src/eva2/tools/des/DESSolver.java
similarity index 96%
rename from src/eva2/server/go/problems/inference/des/DESSolver.java
rename to src/eva2/tools/des/DESSolver.java
index d3cc9709..50d814dc 100644
--- a/src/eva2/server/go/problems/inference/des/DESSolver.java
+++ b/src/eva2/tools/des/DESSolver.java
@@ -6,7 +6,7 @@
  * @version 1.0
  */
 
-package eva2.server.go.problems.inference.des;
+package eva2.tools.des;
 
 import java.io.Serializable;
 
diff --git a/src/eva2/server/go/problems/inference/des/DESystem.java b/src/eva2/tools/des/DESystem.java
similarity index 95%
rename from src/eva2/server/go/problems/inference/des/DESystem.java
rename to src/eva2/tools/des/DESystem.java
index fcd4af8c..80c8fd8d 100644
--- a/src/eva2/server/go/problems/inference/des/DESystem.java
+++ b/src/eva2/tools/des/DESystem.java
@@ -1,4 +1,4 @@
-package eva2.server.go.problems.inference.des;
+package eva2.tools.des;
 
 import java.io.Serializable;
 
diff --git a/src/eva2/server/go/problems/inference/des/RKSolver.java b/src/eva2/tools/des/RKSolver.java
similarity index 99%
rename from src/eva2/server/go/problems/inference/des/RKSolver.java
rename to src/eva2/tools/des/RKSolver.java
index 1228a9ef..fce0fca9 100644
--- a/src/eva2/server/go/problems/inference/des/RKSolver.java
+++ b/src/eva2/tools/des/RKSolver.java
@@ -1,4 +1,4 @@
-package eva2.server.go.problems.inference.des;
+package eva2.tools.des;
 
 import eva2.tools.Mathematics;