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Fix matlab interface.

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pom.xml now targets Java 1.6 since Matlab can't handle 1.7.
This commit is contained in:
Fabian Becker 2013-06-24 15:46:24 +02:00
parent b4d90e411e
commit bcf9e6fd6f
6 changed files with 20 additions and 20 deletions
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4
pom.xml
View File

@ -73,8 +73,8 @@
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<source>1.7</source>
<target>1.7</target>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>

12
resources/MatlabInterface/@JEInterface/JEInterface.m
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@ -69,11 +69,11 @@ else
end
if (strcmp(datatype,'double'))
int.dataType=eva2.server.go.problems.MatlabProblemDataTypeEnum.typeDouble;
int.dataType=eva2.optimization.problems.MatlabProblemDataTypeEnum.typeDouble;
elseif strcmp(datatype, 'int')
int.dataType=eva2.server.go.problems.MatlabProblemDataTypeEnum.typeInteger;
int.dataType=eva2.optimization.problems.MatlabProblemDataTypeEnum.typeInteger;
elseif strcmp(datatype, 'binary')
int.dataType=eva2.server.go.problems.MatlabProblemDataTypeEnum.typeBinary;
int.dataType=eva2.optimization.problems.MatlabProblemDataTypeEnum.typeBinary;
else
error('Invalid data type, select double, int, or binary!');
end
@ -127,16 +127,16 @@ end
display(getOptions(int));
% finally create the java object
if (isempty(int.initialRange)) % binary case
int.mp = eva2.server.go.problems.MatlabProblem(int.dim, int.dataType, int.range);
int.mp = eva2.optimization.problems.MatlabProblem(int.dim, int.dataType, int.range);
else
% size(int.range);
% size(int.initialRange);
% eq(size(int.range), size(int.initialRange))
% disp('-------');
if (isempty(int.range) || (sum(eq(size(int.range), size(int.initialRange)))==2))
int.mp = eva2.server.go.problems.MatlabProblem(int.dim, int.dataType, int.range, int.initialRange);
int.mp = eva2.optimization.problems.MatlabProblem(int.dim, int.dataType, int.range, int.initialRange);
%int.mp.getIndividualTemplate().setMutationOperator( ...
% eva2.server.go.operators.mutation.MutateEAMixer(eva2.server.go.operators.mutation.MutateGASwapBits, eva2.server.go.operators.mutation.MutateGAUniform));
% eva2.optimization.operators.mutation.MutateEAMixer(eva2.optimization.operators.mutation.MutateGASwapBits, eva2.optimization.operators.mutation.MutateGAUniform));
else
error('Mismatching dimensions of range and initial range!');
end

14
resources/MatlabInterface/@JEInterface/optimize.m
View File

@ -31,14 +31,14 @@ if ((nargin == 2) || (nargin == 3))
if (ischar(maxEvals)) ; maxEvals= str2num(maxEvals); end;
if (ischar(fTol)) ; fTol = str2num(fTol); end;
import eva2.server.go.operators.terminators.PhenotypeConvergenceTerminator;
import eva2.server.go.operators.terminators.FitnessConvergenceTerminator;
import eva2.server.go.operators.terminators.PopulationMeasureTerminator;
import eva2.server.go.operators.terminators.PopulationMeasureTerminator.*;
import eva2.server.go.operators.terminators.CombinedTerminator;
import eva2.server.go.operators.terminators.EvaluationTerminator;
import eva2.optimization.operators.terminators.PhenotypeConvergenceTerminator;
import eva2.optimization.operators.terminators.FitnessConvergenceTerminator;
import eva2.optimization.operators.terminators.PopulationMeasureTerminator;
import eva2.optimization.operators.terminators.PopulationMeasureTerminator.*;
import eva2.optimization.operators.terminators.CombinedTerminator;
import eva2.optimization.operators.terminators.EvaluationTerminator;
import eva2.OptimizerFactory;
import eva2.server.go.problems.MatlabProblem;
import eva2.optimization.problems.MatlabProblem;
% set some default values if theyre not given
% fminsearch, for example, always uses TolX and TolFun with default

2
resources/MatlabInterface/@JEInterface/runEvalLoopJE.m
View File

@ -22,7 +22,7 @@ end
% disp(sprintf('creating mediator'));
% set up a mediator and inform JE
int.mediator = eva2.server.go.problems.MatlabEvalMediator(int.opts.NiceSleepTime);
int.mediator = eva2.optimization.problems.MatlabEvalMediator(int.opts.NiceSleepTime);
int.mp.setMediator(int.mediator);
JEMediator=int.mediator;
createStopBox=int.opts.CreateStopBox;

6
resources/MatlabInterface/@JEInterface/testEvalFunc.m
View File

@ -2,7 +2,7 @@ function testEvalFunc(int)
% Test the fitness function output format.
wordwidth=32;
if (strcmp(int.dataType,eva2.server.go.problems.MatlabProblemDataTypeEnum.typeBinary))
if (strcmp(int.dataType,eva2.optimization.problems.MatlabProblemDataTypeEnum.typeBinary))
% binary problem
s=sprintf('Binary problem of bitwidth %d', int.dim);
disp(s);
@ -13,7 +13,7 @@ if (strcmp(int.dataType,eva2.server.go.problems.MatlabProblemDataTypeEnum.typeBi
%x(numInts)=bitshift(x(numInts),-overheadBits); % shift right by overhead
bs=eva2.tools.math.RNG.randomBitSet(0.5, int.dim);
x=convertUnsignedJE(int, bs);
elseif strcmp(int.dataType,eva2.server.go.problems.MatlabProblemDataTypeEnum.typeDouble)
elseif strcmp(int.dataType,eva2.optimization.problems.MatlabProblemDataTypeEnum.typeDouble)
% double problem
x=rand(1, int.dim);
s=sprintf('Real valued problem in %d dimensions and range %s ', int.dim, mat2str(int.range));
@ -21,7 +21,7 @@ elseif strcmp(int.dataType,eva2.server.go.problems.MatlabProblemDataTypeEnum.typ
for i=1:int.dim
x(i)=int.range(i,1)+x(i)*(int.range(i,2)-int.range(i,1));
end
elseif strcmp(int.dataType,eva2.server.go.problems.MatlabProblemDataTypeEnum.typeInteger)
elseif strcmp(int.dataType,eva2.optimization.problems.MatlabProblemDataTypeEnum.typeInteger)
% integer problem
s=sprintf('Real valued problem in %d dimensions and range %s ', int.dim, mat2str(int.range));
disp(s);

2
resources/MatlabInterface/JEInterface-examples.m
View File

@ -19,7 +19,7 @@ finalPop=getMultipleResults(JI);
R=30;
JI=JEInterface(@testfun, 'binary', R, R, 4, 'Display', 'iter');
JI=setOutputAllStatsFields(JI, 0); % suppress output of additional statistics, spares runtime with large populations
JI=optimizeWith(JI, 3, 'population', eva2.server.go.populations.Population(1000);
JI=optimizeWith(JI, 3, 'population', eva2.optimization.populations.Population(1000);
[sol, fit]=getResult(JI);
finalPop=getMultipleResults(JI);