Changed Description annotation.

Added @Description to all F-Functions

src/eva2/gui/BeanInspector.java

@@ -638,7 +638,7 @@ public class BeanInspector {
                 Description description = obj.getClass().getAnnotation(Description.class);
                 if (description != null) {
                     infoBf.append("\t");
-                    infoBf.append(description.text());
+                    infoBf.append(description.value());
                 }
             }
 

src/eva2/gui/OptimizationEditorPanel.java

@@ -356,7 +356,7 @@ public class OptimizationEditorPanel extends JPanel implements ItemListener {
             if (tip == null || tip.isEmpty()) {
                 Description description = instances.get(i).getAnnotation(Description.class);
                 if (description != null) {
-                    tip = description.text();
+                    tip = description.value();
                 }
             }
 

src/eva2/optimization/go/StandaloneOptimization.java

@@ -33,7 +33,7 @@ import java.text.SimpleDateFormat;
 import java.util.ArrayList;
 import java.util.Date;
 
-@eva2.util.annotation.Description(text = "This is a simple example framework for Evolutionary Algorithms.")
+@eva2.util.annotation.Description(value = "This is a simple example framework for Evolutionary Algorithms.")
 public class StandaloneOptimization implements InterfaceStandaloneOptimization, InterfacePopulationChangedEventListener, java.io.Serializable {
 
     // Interface GUI Stuff

src/eva2/optimization/individuals/AbstractEAIndividualComparator.java

@@ -19,7 +19,7 @@ import java.util.Comparator;
  * @author mkron
  * @see #AbstractEAIndividual().isDominatingFitness(double[], double[])
  */
-@eva2.util.annotation.Description(text = "A comparator class for general EA individuals. Compares individuals based on their fitness in context of minimization.")
+@eva2.util.annotation.Description(value = "A comparator class for general EA individuals. Compares individuals based on their fitness in context of minimization.")
 public class AbstractEAIndividualComparator implements Comparator<Object>, Serializable {
     // flag whether a data field should be used.
     private String indyDataKey = "";

src/eva2/optimization/individuals/ESIndividualBinaryData.java

@@ -14,7 +14,7 @@ import java.util.BitSet;
  * This individual uses a real-valued genotype to code for binary values, either
  * by using a threshold value of by interpreting the double value as probability.
  */
-@eva2.util.annotation.Description(text = "This is an ES individual adopted to optimize binary values.")
+@eva2.util.annotation.Description(value = "This is an ES individual adopted to optimize binary values.")
 public class ESIndividualBinaryData extends AbstractEAIndividual implements InterfaceESIndividual, InterfaceDataTypeBinary, java.io.Serializable {
 
     private BitSet m_Phenotype = new BitSet();

src/eva2/optimization/individuals/ESIndividualDoubleData.java

@@ -15,7 +15,7 @@ import eva2.util.annotation.Description;
 /**
  * This individual uses a real-valued genotype to code for double values.
  */
-@Description(text = "This is an ES individual suited to optimize double values.")
+@Description(value = "This is an ES individual suited to optimize double values.")
 public class ESIndividualDoubleData extends AbstractEAIndividual implements InterfaceESIndividual, InterfaceDataTypeDouble, java.io.Serializable {
 
     private double[] genotype;

src/eva2/optimization/individuals/ESIndividualIntegerData.java

@@ -11,7 +11,7 @@ import eva2.util.annotation.Description;
 /**
  * This individual uses a real-valued genotype to code for integer values.
  */
-@Description(text = "This is an ES individual suited to optimize integer values.")
+@Description(value = "This is an ES individual suited to optimize integer values.")
 public class ESIndividualIntegerData extends AbstractEAIndividual implements InterfaceESIndividual, InterfaceDataTypeInteger, java.io.Serializable {
 
     private double[] genotype;

src/eva2/optimization/individuals/ESIndividualPermutationData.java

@@ -12,7 +12,7 @@ import eva2.util.annotation.Description;
  * This individual uses a real-valued genotype to code for a permutations,
  * the sorting of the real-valued genotype gives the permutation.
  */
-@Description(text = "This is an ES individual suited to optimize permutations.")
+@Description(value = "This is an ES individual suited to optimize permutations.")
 public class ESIndividualPermutationData extends AbstractEAIndividual implements InterfaceESIndividual, InterfaceDataTypePermutation, java.io.Serializable {
 
     private double[][] m_Genotype;

src/eva2/optimization/individuals/GAESIndividualBinaryDoubleData.java

@@ -12,7 +12,7 @@ import java.util.BitSet;
 /**
  * This individual combines a binary and a real-valued phenotype.
  */
-@Description(text = "This is a mixed data type combining a BitSet and a real-valued vector.")
+@Description(value = "This is a mixed data type combining a BitSet and a real-valued vector.")
 public class GAESIndividualBinaryDoubleData extends AbstractEAIndividual implements InterfaceDataTypeBinary, InterfaceDataTypeDouble, java.io.Serializable {
 
     private InterfaceDataTypeDouble m_Numbers = new ESIndividualDoubleData();

src/eva2/optimization/individuals/GAIndividualBinaryData.java

@@ -14,7 +14,7 @@ import java.util.BitSet;
 /**
  * This individual uses a binary genotype to code for binary values.
  */
-@Description(text = "This is a GA individual suited to optimize binary values.")
+@Description(value = "This is a GA individual suited to optimize binary values.")
 public class GAIndividualBinaryData extends AbstractEAIndividual implements InterfaceDataTypeBinary, InterfaceGAIndividual, java.io.Serializable {
 
     protected BitSet m_Genotype = new BitSet();

src/eva2/optimization/individuals/GAIndividualDoubleData.java

@@ -17,7 +17,7 @@ import java.util.BitSet;
  * This individual uses a binary genotype to code for double values
  * using two alternative encodings.
  */
-@Description(text = "This is a GA individual suited to optimize double values.")
+@Description(value = "This is a GA individual suited to optimize double values.")
 public class GAIndividualDoubleData extends AbstractEAIndividual implements InterfaceGAIndividual, InterfaceDataTypeDouble, java.io.Serializable {
 
     private double[] m_Phenotype;

src/eva2/optimization/individuals/GAIndividualIntegerData.java

@@ -16,7 +16,7 @@ import java.util.BitSet;
  * This individual uses a binary genotype to code for binary values using
  * two alternative encodings.
  */
-@Description(text = "This is a GA individual suited to optimize int values.")
+@Description(value = "This is a GA individual suited to optimize int values.")
 public class GAIndividualIntegerData extends AbstractEAIndividual implements InterfaceGAIndividual, InterfaceDataTypeInteger, java.io.Serializable {
 
     private int[] phenotype;

src/eva2/optimization/individuals/GEIndividualProgramData.java

@@ -18,7 +18,7 @@ import java.util.BitSet;
  * This individual uses a binary genotype to code for a tree-based representation
  * using a BNF grammar, see also Grammatical Evolution.
  */
-@Description(text = "This is a GE individual suited to optimize programs.")
+@Description(value = "This is a GE individual suited to optimize programs.")
 public class GEIndividualProgramData extends AbstractEAIndividual implements InterfaceGAIndividual, InterfaceDataTypeProgram, java.io.Serializable {
 
     protected GPArea[] m_Area;

src/eva2/optimization/individuals/GIIndividualIntegerData.java

@@ -11,7 +11,7 @@ import eva2.util.annotation.Description;
 /**
  * This individual uses a integer genotype to code for integer values.
  */
-@Description(text = "This is a GI individual suited to optimize int values.")
+@Description(value = "This is a GI individual suited to optimize int values.")
 public class GIIndividualIntegerData extends AbstractEAIndividual implements InterfaceGIIndividual, InterfaceDataTypeInteger, java.io.Serializable {
 
     private int[] m_Phenotype;

src/eva2/optimization/individuals/GIOBGAIndividualIntegerPermutationData.java

@@ -9,7 +9,7 @@ import eva2.util.annotation.Description;
 /**
  * This individual combines a binary and a real-valued phenotype.
  */
-@Description(text = "This is a mixed data type combining an integer vector with a permutation vector.")
+@Description(value = "This is a mixed data type combining an integer vector with a permutation vector.")
 public class GIOBGAIndividualIntegerPermutationData extends AbstractEAIndividual implements InterfaceDataTypeInteger, InterfaceDataTypePermutation, java.io.Serializable {
 
     private InterfaceDataTypeInteger m_Integer = new GIIndividualIntegerData();

src/eva2/optimization/individuals/GPIndividualProgramData.java

@@ -15,7 +15,7 @@ import eva2.util.annotation.Description;
 /**
  * This individual uses a tree-based genotype to code for program trees.
  */
-@Description(text = "This is a GP individual suited to optimize Koza style program trees.")
+@Description(value = "This is a GP individual suited to optimize Koza style program trees.")
 public class GPIndividualProgramData extends AbstractEAIndividual implements InterfaceGPIndividual, InterfaceDataTypeProgram, java.io.Serializable {
 
     protected AbstractGPNode[] genotype;

src/eva2/optimization/individuals/OBGAIndividualPermutationData.java

@@ -14,7 +14,7 @@ import java.util.ArrayList;
  * This individual uses a permutation based genotype to code for
  * permutations.
  */
-@Description(text = "This is a GA individual coding permutations.")
+@Description(value = "This is a GA individual coding permutations.")
 public class OBGAIndividualPermutationData extends AbstractEAIndividual implements InterfaceDataTypePermutation, InterfaceOBGAIndividual, java.io.Serializable {
 
     int[][] phenotype;

src/eva2/optimization/operator/archiving/ArchivingNSGA.java

@@ -6,7 +6,7 @@ import eva2.optimization.population.Population;
 /**
  * The non dominated sorting GA archiving method, based on dominace sorting.
  */
-@eva2.util.annotation.Description(text="Non-dominating sorting GA revision 1.0.")
+@eva2.util.annotation.Description(value ="Non-dominating sorting GA revision 1.0.")
 public class ArchivingNSGA extends AbstractArchiving implements java.io.Serializable {
 
     public InterfaceRemoveSurplusIndividuals m_Cleaner = new RemoveSurplusIndividualsDynamicHyperCube();

src/eva2/optimization/operator/terminators/CombinedTerminator.java

@@ -8,7 +8,7 @@ import eva2.util.annotation.Description;
 
 import java.io.Serializable;
 
-@Description(text = "Boolean combination of two terminators.")
+@Description(value = "Boolean combination of two terminators.")
 public class CombinedTerminator implements InterfaceTerminator, Serializable {
     /**
      *

src/eva2/optimization/operator/terminators/EvaluationTerminator.java

@@ -13,7 +13,7 @@ import java.io.Serializable;
  * the exact number of fitness calls, since terminators are only once per
  * generation.
  */
-@Description(text = "Terminates after the given number of fitness calls.")
+@Description(value = "Terminates after the given number of fitness calls.")
 public class EvaluationTerminator implements InterfaceTerminator,
         Serializable {
     private String msg = "Not terminated.";

src/eva2/optimization/operator/terminators/GenerationTerminator.java

@@ -10,7 +10,7 @@ import java.io.Serializable;
 /**
  *
  */
-@Description(text = "Terminate after the given number of generations")
+@Description(value = "Terminate after the given number of generations")
 public class GenerationTerminator implements InterfaceTerminator, Serializable {
 
     /**

src/eva2/optimization/problems/F10Problem.java

@@ -1,14 +1,12 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.individuals.ESIndividualDoubleData;
+import eva2.util.annotation.Description;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 30.06.2005
- * Time: 14:33:07
- * To change this template use File | Settings | File Templates.
+ * Weierstrass-Mandelbrot Fractal Function
  */
+@Description("Weierstrass-Mandelbrot Fractal Function")
 public class F10Problem extends AbstractProblemDoubleOffset implements InterfaceMultimodalProblem, java.io.Serializable {
 
     private double m_D = 1.5;
@@ -82,9 +80,6 @@ public class F10Problem extends AbstractProblemDoubleOffset implements Interface
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -96,15 +91,6 @@ public class F10Problem extends AbstractProblemDoubleOffset implements Interface
         return "F10 Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Weierstrass-Mandelbrot Fractal Function";
-    }
-
     /**
      * This method allows you to set/get d.
      *

src/eva2/optimization/problems/F11Problem.java

@@ -1,14 +1,12 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.individuals.ESIndividualDoubleData;
+import eva2.util.annotation.Description;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 30.06.2005
- * Time: 14:59:23
- * To change this template use File | Settings | File Templates.
+ * Griewank Function
  */
+@Description("Griewank Function")
 public class F11Problem extends AbstractProblemDoubleOffset implements InterfaceMultimodalProblem, java.io.Serializable {
 
     private double m_D = 4000;
@@ -71,9 +69,6 @@ public class F11Problem extends AbstractProblemDoubleOffset implements Interface
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -85,15 +80,6 @@ public class F11Problem extends AbstractProblemDoubleOffset implements Interface
         return "F11-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Griewank Function";
-    }
-
     /**
      * This method allows you to set/get d.
      *

src/eva2/optimization/problems/F12Problem.java

@@ -1,14 +1,13 @@
 package eva2.optimization.problems;
 
+import eva2.util.annotation.Description;
+
 import java.io.Serializable;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 30.06.2005
- * Time: 14:59:33
- * To change this template use File | Settings | File Templates.
+ * Galar Function
  */
+@Description("Galar Function")
 public class F12Problem extends AbstractProblemDoubleOffset implements Serializable {
     private final static double f12range = 5.;
 
@@ -66,9 +65,6 @@ public class F12Problem extends AbstractProblemDoubleOffset implements Serializa
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -79,14 +75,4 @@ public class F12Problem extends AbstractProblemDoubleOffset implements Serializa
     public String getName() {
         return "F12 Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Galar Function";
-    }
-
 }

src/eva2/optimization/problems/F13Problem.java

@@ -3,11 +3,13 @@ package eva2.optimization.problems;
 import eva2.gui.editor.GenericObjectEditor;
 import eva2.optimization.individuals.ESIndividualDoubleData;
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 /**
  * Schwefels sine root function (1981) with a minimum at 420.9687^n of value 0.
  * Function f(x) = (418.9829 * n) - sum_n(x_i * sin(sqrt(abs(x_i)))) + (418.9829 * n);
  */
+@Description("Schwefel's sine-root Function (multimodal, 1981). Remember to use range check! Note that rotating the function may make it easier because new, and better, minima may enter the search space.")
 public class F13Problem extends AbstractProblemDoubleOffset implements InterfaceMultimodalProblem, InterfaceInterestingHistogram {
 
     public F13Problem() {
@@ -101,9 +103,7 @@ public class F13Problem extends AbstractProblemDoubleOffset implements Interface
             return new SolutionHistogram(0, 3200, 12);
         }
     }
-/**********************************************************************************************************************
- * These are for GUI
- */
+
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -115,15 +115,6 @@ public class F13Problem extends AbstractProblemDoubleOffset implements Interface
         return "F13-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Schwefels sine-root Function (multimodal, 1981). Remember to use range check! Note that rotating the function may make it easier because new, and better, minima may enter the search space.";
-    }
-
     @Override
     public void setDefaultAccuracy(double v) {
         super.SetDefaultAccuracy(v);

src/eva2/optimization/problems/F14Problem.java

@@ -1,14 +1,12 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.individuals.ESIndividualDoubleData;
+import eva2.util.annotation.Description;
 
 /**
- * Created by IntelliJ IDEA.
- * User: mkron
- * Date: 01.09.2007
- * Time: 19:15:03
- * To change this template use File | Settings | File Templates.
+ * F14 function: numerous optima in linear order which may be rotated.
  */
+@Description("F14 function: numerous optima in linear order which may be rotated")
 public class F14Problem extends AbstractProblemDoubleOffset implements InterfaceMultimodalProblem, java.io.Serializable {
     double rotation = 0.;
     double rotationDX = 2;
@@ -79,9 +77,6 @@ public class F14Problem extends AbstractProblemDoubleOffset implements Interface
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -92,13 +87,4 @@ public class F14Problem extends AbstractProblemDoubleOffset implements Interface
     public String getName() {
         return "F14-Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "F14 function: numerous optima in linear order which may be rotated.";
-    }
 }

src/eva2/optimization/problems/F15Problem.java

@@ -1,6 +1,7 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 import java.io.Serializable;
 
@@ -8,7 +9,7 @@ import java.io.Serializable;
  * The Levy-function, from Levy, A., and Montalvo, A. (1985). Also described in
  * "A Trust-Region Algorithm for Global Optimization", Bernardetta Addisy and Sven Leyfferz, 2004/2006.
  */
-
+@Description("The Levy-function, from Levy, A., and Montalvo, A. (1985)")
 public class F15Problem extends AbstractProblemDouble implements Serializable, InterfaceInterestingHistogram {
     private int problemDimension = 10;
 
@@ -75,9 +76,4 @@ public class F15Problem extends AbstractProblemDouble implements Serializable, I
     public String getName() {
         return "F15-Problem";
     }
-
-    public static String globalInfo() {
-        return "The Levy-function, from Levy, A., and Montalvo, A. (1985)";
-    }
-
 }

src/eva2/optimization/problems/F16Problem.java

@@ -1,13 +1,13 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 /**
  * The Vincent function: Multiple optima with increasing density near the lower bounds,
  * therefore decreasing attractor size. All have an equal best fitness of zero.
- *
- * @author mkron
  */
+@Description("Vincent function: Multiple optima with increasing densitiy near the lower bounds, therefore decreasing attractor size. All have an equal best fitness of zero")
 public class F16Problem extends AbstractProblemDouble implements InterfaceMultimodalProblem, Interface2DBorderProblem, InterfaceInterestingHistogram {
     int dim = 10;
 
@@ -66,10 +66,6 @@ public class F16Problem extends AbstractProblemDouble implements InterfaceMultim
         return "Vincent";
     }
 
-    public static String globalInfo() {
-        return "The Vincent function: Multiple optima with increasing densitiy near the lower bounds, therefore decreasing attractor size. All have an equal best fitness of zero.";
-    }
-
     @Override
     public SolutionHistogram getHistogram() {
         return new SolutionHistogram(-0.001, 0.599, 15);

src/eva2/optimization/problems/F17Problem.java

@@ -1,6 +1,7 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 /**
  * Bohachevsky function, numerous optima on an oval hyperparabola with similar attractor sizes
@@ -8,6 +9,7 @@ import eva2.optimization.operator.postprocess.SolutionHistogram;
  * "Niche radius adaption in the CMA-ES Niching Algorithm".
  * f_B(\vec{x})=\sum_{i=1}^{n-1} x_i^2+2(x_{i+1}^2)+0.7-0.3 cos (3 \pi x_i)-0.4 cos (4 \pi x_{i+1})
  */
+@Description("Bohachevsky function, numerous optima on an oval hyperparabola with similar attractor sizes but decreasing fitness towards the bounds")
 public class F17Problem extends AbstractProblemDouble implements
         InterfaceMultimodalProblem, InterfaceInterestingHistogram {
     int dim = 10;
@@ -59,10 +61,6 @@ public class F17Problem extends AbstractProblemDouble implements
         return "F17-Problem";
     }
 
-    public static String globalInfo() {
-        return "Bohachevsky function, numerous optima on an oval hyperparabola with similar attractor sizes but decreasing fitness towards the bounds.";
-    }
-
     @Override
     public SolutionHistogram getHistogram() {
         if (getProblemDimension() < 15) {

src/eva2/optimization/problems/F18Problem.java

@@ -1,5 +1,11 @@
 package eva2.optimization.problems;
 
+import eva2.util.annotation.Description;
+
+/**
+ * N-Function from Shir&Baeck, PPSN 2006.
+ */
+@Description("N-Function from Shir&Baeck, PPSN 2006")
 public class F18Problem extends AbstractProblemDouble implements
         InterfaceMultimodalProblem {
     int dim = 10;
@@ -54,10 +60,6 @@ public class F18Problem extends AbstractProblemDouble implements
         return "F18-Problem";
     }
 
-    public static String globalInfo() {
-        return "N-Function from Shir&Baeck, PPSN 2006.";
-    }
-
     /**
      * @return the alpha
      */

src/eva2/optimization/problems/F19Problem.java

@@ -2,6 +2,7 @@ package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
 import eva2.tools.math.RNG;
+import eva2.util.annotation.Description;
 
 import java.util.Arrays;
 import java.util.Random;
@@ -10,8 +11,8 @@ import java.util.Random;
  * Fletcher-Powell function with up to 2^n optima from Shir&Baeck, PPSN 2006,
  * after Bäck 1996. Alphas and Matrices A and B are randomly created with a fixed seed.
  *
- * @author mkron
  */
+@Description("Fletcher-Powell function")
 public class F19Problem extends AbstractProblemDouble implements
         InterfaceMultimodalProblem, InterfaceInterestingHistogram, InterfaceFirstOrderDerivableProblem {
     int dim = 10;
@@ -121,10 +122,6 @@ public class F19Problem extends AbstractProblemDouble implements
         return "F19-Problem";
     }
 
-    public static String globalInfo() {
-        return "Fletcher-Powell function with up to 2^n optima from Shir&Baeck, PPSN 2006, after Bäck 1996. Alphas and Matrices A and B are randomly created with a fixed seed.";
-    }
-
     @Override
     public SolutionHistogram getHistogram() {
         if (getProblemDimension() < 15) {

src/eva2/optimization/problems/F1Problem.java

@@ -7,7 +7,7 @@ import eva2.util.annotation.Description;
 /**
  * F1 Sphere Problem
  */
-@Description(text="Sphere Problem")
+@Description(value ="Sphere Problem")
 public class F1Problem extends AbstractProblemDoubleOffset implements Interface2DBorderProblem, InterfaceHasInitRange, java.io.Serializable, InterfaceFirstOrderDerivableProblem {
     private double initialRangeRatio = 1.; // reduce to initialize in a smaller subrange of the original range (in the corner box)
 
@@ -91,15 +91,6 @@ public class F1Problem extends AbstractProblemDoubleOffset implements Interface2
         return "F1-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "F1: multidimensional parabola problem";
-    }
-
     @Override
     public double[] getFirstOrderGradients(double[] x) {
         x = rotateMaybe(x);

src/eva2/optimization/problems/F20Problem.java

@@ -1,15 +1,22 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 import java.io.Serializable;
 
 /**
  * The multi-modal, multi-funnel Rana function, f_rana = sum_{i=0}^{n-2} (g(x_i, x_{i+1})
  * with g(x,y) = x sin(a)cos(b)+(y+1)cos(a)sin(b), a=sqrt(|-x+y+1|), b=sqrt(|x+y+1|).
+ *
+ * The Rana function is non-separable, highly multi-modal and multi-funnel.
+ * There are diagonal ridges across the search space and the optima are close to the bounds.
+ * The minimum fitness f(x*) is close to (n-1)*r for dimension n and default range r, by which
+ * this implementation may be shifted to the positive domain.
  * <p/>
  * For gnuplot: x *sin(sqrt(abs(-x+y+1)))*cos(sqrt(abs(x+y+1)))+(y+1)*cos(sqrt(abs(-x+y+1)))*sin(sqrt(abs(x+y+1)))
  */
+@Description("Rana function")
 public class F20Problem extends AbstractProblemDouble implements Serializable, InterfaceInterestingHistogram {
     private int dim = 10;
     private boolean shiftFit = false;

src/eva2/optimization/problems/F21Problem.java

@@ -1,6 +1,7 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.operator.postprocess.SolutionHistogram;
+import eva2.util.annotation.Description;
 
 import java.util.Random;
 
@@ -9,8 +10,8 @@ import java.util.Random;
  * The number of optima is equal to the number of dimensions.
  * The positions and height values of the peaks are initialized randomly with a fixed seed for reproducibility.
  *
- * @author mkron
  */
+@Description("Langerman function")
 public class F21Problem extends AbstractProblemDouble implements InterfaceMultimodalProblem, InterfaceInterestingHistogram {
     private double[] heights = null; // will receive random positions within the range
     private double[][] peaks = null; // will receive values in [0,1] as peak height values
@@ -29,10 +30,6 @@ public class F21Problem extends AbstractProblemDouble implements InterfaceMultim
         return "Langerman-Function";
     }
 
-    public static String globalInfo() {
-        return "The Langerman function, with n peaks each of which surrounded by circular ridges.";
-    }
-
     @Override
     public double getRangeLowerBound(int dim) {
         return 0;
@@ -56,8 +53,6 @@ public class F21Problem extends AbstractProblemDouble implements InterfaceMultim
                 peaks[i][j] = getRangeLowerBound(i) + rnd.nextDouble() * (getRangeUpperBound(i) - getRangeLowerBound(i));
             }
         }
-//		System.out.println("peaks is " + BeanInspector.toString(peaks));
-//		System.out.println("heights is " + BeanInspector.toString(heights));
     }
 
     @Override

src/eva2/optimization/problems/F2Problem.java

@@ -3,14 +3,10 @@ package eva2.optimization.problems;
 import eva2.optimization.individuals.ESIndividualDoubleData;
 import eva2.optimization.population.Population;
 import eva2.optimization.strategies.GradientDescentAlgorithm;
+import eva2.util.annotation.Description;
 
-/**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 01.09.2004
- * Time: 19:03:09
- * To change this template use File | Settings | File Templates.
- */
+@Description(value ="Generalized Rosenbrock's function.")
+@SuppressWarnings("unused")
 public class F2Problem extends AbstractProblemDoubleOffset implements InterfaceLocalSearchable, InterfaceMultimodalProblem, java.io.Serializable, InterfaceFirstOrderDerivableProblem {
 
     private transient GradientDescentAlgorithm localSearchOptimizer = null;
@@ -96,9 +92,6 @@ public class F2Problem extends AbstractProblemDoubleOffset implements InterfaceL
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -110,15 +103,6 @@ public class F2Problem extends AbstractProblemDoubleOffset implements InterfaceL
         return "F2-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Generalized Rosenbrock's function.";
-    }
-
     @Override
     public void doLocalSearch(Population pop) {
         if (localSearchOptimizer == null) {

src/eva2/optimization/problems/F3Problem.java

@@ -1,14 +1,12 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.individuals.ESIndividualDoubleData;
+import eva2.util.annotation.Description;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 01.09.2004
- * Time: 19:15:03
- * To change this template use File | Settings | File Templates.
+ *
  */
+@Description("Step function.")
 public class F3Problem extends AbstractProblemDoubleOffset implements java.io.Serializable {
 
     public F3Problem() {
@@ -77,13 +75,4 @@ public class F3Problem extends AbstractProblemDoubleOffset implements java.io.Se
     public String getName() {
         return "F3 Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Step function.";
-    }
 }

src/eva2/optimization/problems/F4Problem.java

@@ -1,14 +1,14 @@
 package eva2.optimization.problems;
 
+import eva2.util.annotation.Description;
+
 import java.io.Serializable;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 01.09.2004
- * Time: 19:28:33
- * To change this template use File | Settings | File Templates.
+ *
  */
+@SuppressWarnings("unused")
+@Description("Quadratic Function with noise.")
 public class F4Problem extends AbstractProblemDoubleOffset implements Serializable {
     final static double f4range = 1.28;
 
@@ -65,9 +65,6 @@ public class F4Problem extends AbstractProblemDoubleOffset implements Serializab
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -78,13 +75,4 @@ public class F4Problem extends AbstractProblemDoubleOffset implements Serializab
     public String getName() {
         return "F4 Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Quadratic Function with noise.";
-    }
 }

src/eva2/optimization/problems/F5Problem.java

@@ -1,14 +1,13 @@
 package eva2.optimization.problems;
 
+import eva2.util.annotation.Description;
+
 import java.io.Serializable;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 01.09.2004
- * Time: 19:30:52
- * To change this template use File | Settings | File Templates.
+ *
  */
+@Description("Schwefel's Function.")
 public class F5Problem extends AbstractProblemDoubleOffset implements Serializable {
     final static double f5range = 65.536;
 
@@ -70,9 +69,6 @@ public class F5Problem extends AbstractProblemDoubleOffset implements Serializab
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -83,13 +79,4 @@ public class F5Problem extends AbstractProblemDoubleOffset implements Serializab
     public String getName() {
         return "F5 Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Schwefel's Function.";
-    }
 }

src/eva2/optimization/problems/F6Problem.java

@@ -4,12 +4,14 @@ import eva2.optimization.individuals.ESIndividualDoubleData;
 import eva2.optimization.operator.postprocess.SolutionHistogram;
 import eva2.optimization.population.Population;
 import eva2.optimization.strategies.GradientDescentAlgorithm;
+import eva2.util.annotation.Description;
 
 import java.io.Serializable;
 
 /**
  * Generalized Rastrigin's function.
  */
+@Description("Generalized Rastrigins's function.")
 public class F6Problem extends AbstractProblemDoubleOffset
         implements InterfaceMultimodalProblem, InterfaceFirstOrderDerivableProblem, InterfaceLocalSearchable, Serializable, InterfaceInterestingHistogram {
     private double m_A = 10;
@@ -87,9 +89,6 @@ public class F6Problem extends AbstractProblemDoubleOffset
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -101,15 +100,6 @@ public class F6Problem extends AbstractProblemDoubleOffset
         return "F6-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Generalized Rastrigins's function.";
-    }
-
     /**
      * This method allows you to set/get an offset for decision variables.
      *

src/eva2/optimization/problems/F7Problem.java

@@ -5,16 +5,14 @@ import eva2.optimization.individuals.ESIndividualDoubleData;
 import eva2.optimization.population.Population;
 import eva2.tools.SelectedTag;
 import eva2.tools.Tag;
+import eva2.util.annotation.Description;
 
 import java.io.Serializable;
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 30.06.2005
- * Time: 13:23:43
- * To change this template use File | Settings | File Templates.
+ *
  */
+@Description("Sphere Model, changing Environment.")
 public class F7Problem extends AbstractProblemDoubleOffset implements Serializable {
 
     private double m_t = 250;
@@ -112,9 +110,6 @@ public class F7Problem extends AbstractProblemDoubleOffset implements Serializab
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -126,15 +121,6 @@ public class F7Problem extends AbstractProblemDoubleOffset implements Serializab
         return "F7 Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Sphere Model, changing Environment.";
-    }
-
     /**
      * Set the lower limit for the mutation step size with this method.
      *

src/eva2/optimization/problems/F8Problem.java

@@ -7,17 +7,15 @@ import eva2.optimization.population.Population;
 import eva2.optimization.population.PopulationInterface;
 import eva2.tools.ToolBox;
 import eva2.tools.math.Mathematics;
+import eva2.util.annotation.Description;
 
 import java.util.Arrays;
 
 
 /**
- * Created by IntelliJ IDEA.
- * User: streiche
- * Date: 01.09.2004
- * Time: 19:40:28
- * To change this template use File | Settings | File Templates.
+ * Ackley's function.
  */
+@Description("Ackley's function.")
 public class F8Problem extends AbstractProblemDoubleOffset
         implements InterfaceInterestingHistogram, InterfaceMultimodalProblem, //InterfaceFirstOrderDerivableProblem,
         InterfaceMultimodalProblemKnown, java.io.Serializable {
@@ -106,9 +104,6 @@ public class F8Problem extends AbstractProblemDoubleOffset
         initListOfOptima();
     }
 
-    /**********************************************************************************************************************
-     * These are for GUI
-     */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -120,15 +115,6 @@ public class F8Problem extends AbstractProblemDoubleOffset
         return "F8-Problem";
     }
 
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Ackley's function.";
-    }
-
     @Override
     public SolutionHistogram getHistogram() {
         if (getProblemDimension() < 15) {
@@ -140,27 +126,6 @@ public class F8Problem extends AbstractProblemDoubleOffset
         }
     }
 
-//	public double[] getFirstOrderGradients(double[] x) {
-//		double sum1=0, sum2=0;
-//		double[] derivs = new double[x.length];
-//    	x = rotateMaybe(x);
-//        double dim = (double)this.problemDimension;
-//
-//        for (int i = 0; i < x.length; i++) {
-//        	double xi = x[i]-xOffset;
-//        	sum1 += (xi)*(xi);
-//        	sum2 += Math.cos(c * (xi));
-//        }
-//        
-//        for (int i=0; i<x.length; i++) {
-//        	if (sum1==0) derivs[i]=0;
-//        	else derivs[i]=((this.b*2*x[i]*this.a)/(Math.sqrt(sum1/dim)))*Math.exp(-this.b*Math.sqrt(sum1/dim));
-//        	derivs[i]+= ((this.c/dim)*(Math.sin(this.c*x[i])))*Math.exp(sum2/dim);
-//        }
-//        System.out.println("at " + BeanInspector.toString(x) + " sum1 " + sum1 + " sum2 " + sum2 + " deriv " + BeanInspector.toString(derivs));
-//        return derivs;
-//	}
-
     @Override
     public boolean fullListAvailable() {
         return true;
@@ -239,15 +204,11 @@ public class F8Problem extends AbstractProblemDoubleOffset
                     }
                 }
             }
-//			System.out.println("Inited " + listOfOptima.size() + " optima, measures: " + BeanInspector.toString(listOfOptima.getPopulationMeasures(new PhenotypeMetric())));
-//			System.out.println("Inited " + listOfOptima.size() + " optima, measures: " + BeanInspector.toString(listOfOptima.getPopulationMeasures(new EuclideanMetric())));
-//			System.out.println(listOfOptima.getStringRepresentation());
             state_initializing_optima = false;
         }
     }
 
     private double[] refineSolution(AbstractProblemDouble prob, double[] pos, double[] vect, double initStep, double thresh, int fitCrit) {
-//		return AbstractProblemDouble.refineSolutionNMS(prob, pos);
         // a line search along a vector
         double[] tmpP = pos.clone();
         double[] normedVect = Mathematics.normVect(vect);
@@ -290,36 +251,9 @@ public class F8Problem extends AbstractProblemDoubleOffset
                 return false;
             }
         }
-//		else {
-//			if (listOfOptima.isEmpty()) return true;
-//			else {
-//				// test for correctness of the second optimum - if its gradient is nonzero, reinit optima
-//				AbstractEAIndividual testIndy = listOfOptima.getEAIndividual(1);
-//				double grad[] = this.getFirstOrderGradients(testIndy.getDoublePosition());
-//				for (int i=0; i<grad.length; i++) {
-//					if (Math.abs(grad[i])>1e-20) {
-//						listOfOptima.clear();
-//						return true;
-//					}
-//				}
-//				return false;
-//			}
-//		}
     }
 
     private void addOptimum(double[] pos) {
         AbstractProblemDouble.addUnrotatedOptimum(m_ListOfOptima, this, pos);
     }
-
-//	private double[] refineSolution(double[] pos) {
-//		Population population = new Population();
-//		InterfaceDataTypeDouble tmpIndy;
-//		tmpIndy = (InterfaceDataTypeDouble)((AbstractEAIndividual)this.template).clone();
-//		tmpIndy.setDoubleGenotype(pos);
-//		((AbstractEAIndividual)tmpIndy).SetFitness(evaluate(pos));
-//		population.add(tmpIndy);
-//		FitnessConvergenceTerminator convTerm = new FitnessConvergenceTerminator(1e-15, 10, false, true);
-//		int calls = PostProcess.processWithGDA(population, this, convTerm, 0, 0.0000000000000001, 0.01);
-//		return ((InterfaceDataTypeDouble)population.getBestEAIndividual()).getDoubleData();
-//	}
 }

src/eva2/optimization/problems/F9Problem.java

@@ -1,7 +1,12 @@
 package eva2.optimization.problems;
 
 import eva2.optimization.individuals.ESIndividualDoubleData;
+import eva2.util.annotation.Description;
 
+/**
+ * Weighted Sphere Model
+ */
+@Description("Weighted Sphere Model")
 public class F9Problem extends AbstractProblemDoubleOffset implements java.io.Serializable {
 
     public F9Problem() {
@@ -56,9 +61,6 @@ public class F9Problem extends AbstractProblemDoubleOffset implements java.io.Se
         return result;
     }
 
-/**********************************************************************************************************************
- * These are for GUI
- */
     /**
      * This method allows the CommonJavaObjectEditorPanel to read the
      * name to the current object.
@@ -69,13 +71,4 @@ public class F9Problem extends AbstractProblemDoubleOffset implements java.io.Se
     public String getName() {
         return "F9 Problem";
     }
-
-    /**
-     * This method returns a global info string
-     *
-     * @return description
-     */
-    public static String globalInfo() {
-        return "Weighted Sphere Model";
-    }
 }

src/eva2/optimization/problems/FLensProblem.java

@@ -195,7 +195,7 @@ class MyLensViewer extends JPanel implements InterfaceSolutionViewer {
 /**
  *
  */
-@eva2.util.annotation.Description(text="Focussing of a lens is to be optimized.")
+@eva2.util.annotation.Description("Focusing of a lens is to be optimized.")
 public class FLensProblem extends AbstractOptimizationProblem
         implements InterfaceOptimizationProblem, InterfaceHasSolutionViewer, java.io.Serializable {
 

src/eva2/optimization/stat/EvAStatisticalEvaluationParams.java

@@ -6,7 +6,7 @@ import javax.swing.*;
 import java.io.Serializable;
 import java.util.List;
 
-@eva2.util.annotation.Description(text = "Select statistical values to be calculated and tests to be performed.")
+@eva2.util.annotation.Description(value = "Select statistical values to be calculated and tests to be performed.")
 public class EvAStatisticalEvaluationParams implements Serializable {
 
     private StringSelection singleStats = new StringSelection(StatsOnSingleDataSetEnum.mean, StatsOnSingleDataSetEnum.getInfoStrings());

src/eva2/optimization/stat/OptimizationJobList.java

@@ -26,7 +26,7 @@ import java.util.List;
  * A selectable list of EvAJobs. Each job contains a OptimizationParameters instance and potentially
  * statistical data.
  */
-@eva2.util.annotation.Description(text = "Display a set of jobs consisting of a multi-run experiment.")
+@eva2.util.annotation.Description(value = "Display a set of jobs consisting of a multi-run experiment.")
 public class OptimizationJobList extends PropertySelectableList<OptimizationJob> implements Serializable, InterfaceTextListener {
 
     List<InterfaceTextListener> listeners = null;

src/eva2/optimization/stat/StatisticsParameter.java

@@ -29,7 +29,7 @@ import java.util.logging.Logger;
  *
  * @see AbstractStatistics
  */
-@Description(text = "Configure statistics and output of the optimization run. Changes to the data selection state will not take effect during a run.")
+@Description(value = "Configure statistics and output of the optimization run. Changes to the data selection state will not take effect during a run.")
 public class StatisticsParameter implements InterfaceStatisticsParameter, InterfaceNotifyOnInformers, Serializable {
     private static final long serialVersionUID = -8681061379203108390L;
     private static final Logger LOGGER = Logger.getLogger(StatisticsParameter.class.getName());
@@ -272,7 +272,7 @@ public class StatisticsParameter implements InterfaceStatisticsParameter, Interf
     }
 
     public String outputAllFieldsAsTextTipText() {
-        return "Output all available data fields or only the selected entries as text.";
+        return "Output all available data fields or only the selected entries as value.";
     }
 
     public void hideHideable() {

src/eva2/optimization/strategies/ArtificialBeeColony.java

@@ -11,7 +11,7 @@ import eva2.util.annotation.Description;
 /**
  *
  */
-@Description(text = "Artificial Bee Colony Optimizer")
+@Description(value = "Artificial Bee Colony Optimizer")
 public class ArtificialBeeColony implements InterfaceOptimizer {
 
     protected AbstractOptimizationProblem optimizationProblem = new F1Problem();

src/eva2/optimization/strategies/BOA.java

@@ -37,7 +37,7 @@ import java.util.logging.Logger;
  *
  * @author seitz
  */
-@Description(text = "Basic implementation of the Bayesian Optimization Algorithm based on the works by Martin Pelikan and David E. Goldberg.")
+@Description(value = "Basic implementation of the Bayesian Optimization Algorithm based on the works by Martin Pelikan and David E. Goldberg.")
 public class BOA implements InterfaceOptimizer, java.io.Serializable {
     private static final Logger LOGGER = Logger.getLogger(BOA.class.getName());
     transient private InterfacePopulationChangedEventListener m_Listener = null;

src/eva2/optimization/strategies/DifferentialEvolution.java

@@ -31,7 +31,7 @@ import java.util.Vector;
  * dynamically changing problems. If an individual reaches the age limit, it is
  * doomed and replaced by the next challenge vector, even if its worse.
  */
-@Description(text = "Differential Evolution using a steady-state population scheme.")
+@Description(value = "Differential Evolution using a steady-state population scheme.")
 public class DifferentialEvolution implements InterfaceOptimizer, java.io.Serializable {
 
     @Parameter(name = "Population", description = "Edit the properties of the population used.")

src/eva2/optimization/strategies/GeneticAlgorithm.java

@@ -19,7 +19,7 @@ import eva2.util.annotation.Description;
  * global to a more local search. But you have to be careful with that else the
  * GA might not converge. This is a implementation of Genetic Algorithms.
  */
-@Description(text = "This is a basic generational Genetic Algorithm.")
+@Description(value = "This is a basic generational Genetic Algorithm.")
 public class GeneticAlgorithm implements InterfaceOptimizer, java.io.Serializable {
 
     private Population population = new Population();

src/eva2/optimization/strategies/NichePSO.java

@@ -75,7 +75,7 @@ import java.util.Vector;
  * Yilmaz. Particle Swarms for Multimodal Optimization. In: ICANNGA (1), Seiten
  * 366<36>375, 2007
  */
-@Description(text = "A Niching Particle Swarm Optimizer")
+@Description(value = "A Niching Particle Swarm Optimizer")
 public class NichePSO implements InterfaceAdditionalPopulationInformer, InterfaceOptimizer, java.io.Serializable {
 
     /**

src/eva2/util/annotation/Description.java

@@ -8,5 +8,5 @@ import java.lang.annotation.RetentionPolicy;
  */
 @Retention(RetentionPolicy.RUNTIME)
 public @interface Description {
-    String text();
+    String value();
 }