981 Commits

Author SHA1 Message Date
40df065a58 Fix the png export by simply using the FunctionArea graphics. 2014-11-11 17:01:31 +01:00
837c4fea32 JavaDoc fixes and larger code cleanup. 2014-11-11 16:58:43 +01:00
7c896fea8d Test tTestEqSize
refs #34
2014-11-11 02:00:58 +01:00
1af305ae3d Fix variance implementation and add tests to Math package.
refs #34
2014-11-10 17:46:34 +01:00
6386c03f43 Remove Generic from most editors. They are not generic at all. 2014-11-09 18:57:50 +01:00
8f35b0c6d4 Rename StatisticalParameters to remove EvA in name. 2014-11-09 18:50:15 +01:00
88ef09db21 Ensure size of population is set when target size is set. 2014-11-07 23:44:34 +01:00
7756ceac4e Code cleanup through static analysis. 2014-11-07 23:43:17 +01:00
453df310ee Remove crap comments. 2014-11-07 22:58:41 +01:00
d778dc6e24 Make Population a typed ArrayList 2014-11-07 22:45:06 +01:00
1dedb13dc9 Fix bug in humaniseCamelCase. 2014-11-07 21:59:28 +01:00
7605dacb8a CLI adjustments 2014-11-06 15:54:57 +01:00
3358a469a3 Fix bug in PSO implementation. 2014-11-06 11:27:32 +01:00
b7749711ca Remove last uses of SelectedTag from core package
refs #32
2014-11-06 10:25:51 +01:00
1b8b77c52f Remove SelectedTag in StatisticsParameters
refs #32
2014-11-05 22:31:28 +01:00
93aff6d876 Refactor EnumEditor and actually use it.
refs #32
2014-11-05 20:00:00 +01:00
62e436274c Removed SelectedTag from ScatterSearch.
refs #32
2014-11-05 19:02:39 +01:00
e18f9e3b38 Replace SelectedTag with useful enum.
refs #32
2014-11-05 18:53:47 +01:00
a91d9fbecc Close dialogs on escape key press. 2014-11-05 18:53:23 +01:00
a3cf5971fb Remove AlgType Selected in PSO
refs #32
2014-11-04 23:20:15 +01:00
43768d1f96 Removes SelectedType where unnecessary.
refs #32
- Replaced SelectedType with an enum in CombinedTerminator
2014-11-04 22:54:13 +01:00
cb89110e86 Style adjustments for MacOS 2014-11-04 21:44:24 +01:00
efe1a1188b Stuff. 2014-11-04 16:33:55 +01:00
b77cda3046 Cleaner code. 2014-11-04 15:18:26 +01:00
049304e9c1 Removed unused classes (dating back to < 2007..) 2014-11-03 18:50:35 +01:00
a08655a60f Add load/store to configurations.
refs #31
2014-11-03 16:26:01 +01:00
70dd824d13 Remove globalInfo completely
closes #9
- Remove all remaining globalInfo methods.
- Remove globalInfo handling.
- WIN.
2014-11-02 19:04:17 +01:00
551b14fe3d Load and store Optimizations as YAML.
refs #31
- Introduces custom BeanSerializer using SnakeYAML
- Removed previous json package
- Introduces eva2.yaml package
- Hidden properties are not saved
- Reintroduces output in text window
2014-11-02 17:53:42 +01:00
173ebd67c6 Cleanup as well as moving TipText methods to useful @Parameter
annotations.
2014-11-02 16:10:57 +01:00
6bb4616763 Added enum handling to CLI mode. 2014-11-02 16:10:44 +01:00
83ee77f5af Simplify appendArrays method to use generic type. 2014-11-02 15:33:56 +01:00
ea4b12efab Add snakeyaml dependency 2014-11-02 14:53:40 +01:00
8104c9baf7 Rename more init() methods to initialize() 2014-11-02 14:53:27 +01:00
97d79612c2 Merge branch '30-dynamic-cli' 2014-11-02 14:03:59 +01:00
edaa58bd5a Remove apache, gson, cli, reflection dependencies for slimmer EvA2
package.
2014-11-02 14:03:23 +01:00
89402e0b05 Hide several elements from the UI 2014-11-02 13:40:31 +01:00
29a1bb64e3 Performance Optimization in CLI mode
refs #30
- Abort object building if all params found
2014-11-02 13:39:58 +01:00
2a2162c5da More @Parameters and a fix for empty getters. 2014-11-01 18:59:28 +01:00
ee73f5dbe5 Renamed init to initialize.
Added @Parameter annotation to EAIndividual
2014-11-01 18:32:21 +01:00
9efebe8b4b Initial commit of new dynamic CLI mode. 2014-11-01 18:20:58 +01:00
d0268527b0 Rename InterfaceStatisticsParameter to InterfaceStatisticsParameters for
consistentcy with OptimizationParameters
2014-11-01 18:18:58 +01:00
d676e78f61 Few more @Parameter annotations where useful. 2014-11-01 17:57:56 +01:00
cb83280a55 Properly show TipTexts again
refs #29
2014-11-01 14:53:28 +01:00
4909cdd6bc Refactor @Parameter annotation to be applied to setter methods.
fixes #29
- Change Parameter annotation to exist on methods
- Add default value to name field to make it optional
- Adjust classes that already use the annotation
2014-11-01 13:27:33 +01:00
032a4ce087 Added new convertToUnderscore method. 2014-11-01 13:27:09 +01:00
9a8efc403e Move InterfacePopulationChangedEventListener to
eva2.optimization.population.
2014-10-31 19:05:38 +01:00
c8de290e4c Random refactoring to make EvA2Problems work again. 2014-10-31 18:36:15 +01:00
3ac628e85f Rename init method to initialize and fix a bug for SBMLsimulator interop 2014-10-31 15:21:13 +01:00
ba814ec492 Remove hostname from Main 2014-10-31 10:54:51 +01:00
802a36eb60 Consistently have a white background in propertypanel 2014-10-31 00:34:55 +01:00