a08655a60f
Add load/store to configurations.
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refs #31
2014-11-03 16:26:01 +01:00
70dd824d13
Remove globalInfo completely
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closes #9
- Remove all remaining globalInfo methods.
- Remove globalInfo handling.
- WIN.
2014-11-02 19:04:17 +01:00
551b14fe3d
Load and store Optimizations as YAML.
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refs #31
- Introduces custom BeanSerializer using SnakeYAML
- Removed previous json package
- Introduces eva2.yaml package
- Hidden properties are not saved
- Reintroduces output in text window
2014-11-02 17:53:42 +01:00
173ebd67c6
Cleanup as well as moving TipText methods to useful @Parameter
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annotations.
2014-11-02 16:10:57 +01:00
6bb4616763
Added enum handling to CLI mode.
2014-11-02 16:10:44 +01:00
83ee77f5af
Simplify appendArrays method to use generic type.
2014-11-02 15:33:56 +01:00
ea4b12efab
Add snakeyaml dependency
2014-11-02 14:53:40 +01:00
8104c9baf7
Rename more init() methods to initialize()
2014-11-02 14:53:27 +01:00
97d79612c2
Merge branch '30-dynamic-cli'
2014-11-02 14:03:59 +01:00
edaa58bd5a
Remove apache, gson, cli, reflection dependencies for slimmer EvA2
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package.
2014-11-02 14:03:23 +01:00
89402e0b05
Hide several elements from the UI
2014-11-02 13:40:31 +01:00
29a1bb64e3
Performance Optimization in CLI mode
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refs #30
- Abort object building if all params found
2014-11-02 13:39:58 +01:00
2a2162c5da
More @Parameters and a fix for empty getters.
2014-11-01 18:59:28 +01:00
ee73f5dbe5
Renamed init to initialize.
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Added @Parameter annotation to EAIndividual
2014-11-01 18:32:21 +01:00
9efebe8b4b
Initial commit of new dynamic CLI mode.
2014-11-01 18:20:58 +01:00
d0268527b0
Rename InterfaceStatisticsParameter to InterfaceStatisticsParameters for
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consistentcy with OptimizationParameters
2014-11-01 18:18:58 +01:00
d676e78f61
Few more @Parameter annotations where useful.
2014-11-01 17:57:56 +01:00
cb83280a55
Properly show TipTexts again
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refs #29
2014-11-01 14:53:28 +01:00
4909cdd6bc
Refactor @Parameter annotation to be applied to setter methods.
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fixes #29
- Change Parameter annotation to exist on methods
- Add default value to name field to make it optional
- Adjust classes that already use the annotation
2014-11-01 13:27:33 +01:00
032a4ce087
Added new convertToUnderscore method.
2014-11-01 13:27:09 +01:00
9a8efc403e
Move InterfacePopulationChangedEventListener to
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eva2.optimization.population.
2014-10-31 19:05:38 +01:00
c8de290e4c
Random refactoring to make EvA2Problems work again.
2014-10-31 18:36:15 +01:00
3ac628e85f
Rename init method to initialize and fix a bug for SBMLsimulator interop
2014-10-31 15:21:13 +01:00
ba814ec492
Remove hostname from Main
2014-10-31 10:54:51 +01:00
802a36eb60
Consistently have a white background in propertypanel
2014-10-31 00:34:55 +01:00
4db79c69d2
Remove a huge chunk of globalInfo methods.
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refs #9
2014-10-31 00:29:22 +01:00
0b35a9e880
Fixes sidebar issue with content disappearing.
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fixes #6
- Use the correct LayoutManager for the CellRenderer/Editor
- Fixed Button style
2014-10-30 18:42:16 +01:00
b9e43e1174
Fix GUI hidden properties (setProblem) in Optimizers
2014-10-30 16:27:35 +01:00
6465afb3e9
New MaximumTimeTerminator
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closes #28
- Implements new MaximumTimeTerminator
- Bit of cleanup + making some classes final where useful
2014-10-29 23:10:47 +01:00
079715bb24
Fix globalInfo/annotations.
2014-10-29 22:36:10 +01:00
0202692844
Various bugfixes.
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- Properly handle loading/searching of classes with EvA prefix
- Properly open Main window and set Logger when invoked from within JVM
- New F22Problem
2014-10-29 17:44:34 +01:00
668dcb6974
New @Hidden annotation to permanently hide properties from the UI.
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refs #13
2014-10-28 20:35:35 +01:00
24597ad01b
Hide properties from Population.
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refs #13
2014-10-28 19:04:57 +01:00
3a3ebc502b
Cleanup.
2014-10-28 18:53:52 +01:00
90f006a239
Hide problem in optimizers
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refs #13
2014-10-28 18:17:10 +01:00
f752f2bcc6
Update pom.xml
...
no ref
- Remove jchart2d until we can move to it
- Update SCM connector paths
2014-10-27 20:39:11 +01:00
d170727f8e
Small bugfix for setting the problemDimension.
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refs #26
2014-10-27 20:36:23 +01:00
f43e575b18
Abstract getProblemDimension into InterfaceOptimizationProblem
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closes #26
- Clean up problems that implemented getProblemDimension
- Move getProblemDimension to Interface and implement it in AbstractOptimizationProblem
- Output the problem dimension in the Processor (e.g. when running an optimization)
2014-10-27 15:54:16 +01:00
5799e6bdd2
Rename method in EvAStatisticalEvaluation to what it actually does.
2014-10-27 15:16:52 +01:00
adc5f58133
Some corrections to ABC.
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More cleanup.
2014-10-27 09:46:59 +01:00
3a02431d25
Remove ANT files.
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refs #22
2014-10-26 20:24:17 +01:00
adc0d74bf7
Rename AbstractEAIndividualComparator to EAIndividualComparator as it is not abstract.
2014-10-26 19:40:55 +01:00
a8320cad76
Implements ABC algorithm
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fixes #24
2014-10-26 17:08:37 +01:00
5bd11e4624
Small cleanup and better documentation.
2014-10-26 17:08:01 +01:00
ca30e6c705
Start of implementation for AdaptiveDE
2014-10-25 17:34:04 +02:00
2ae2a17cfe
Introduce new AbstractOptimizer
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closes #21
- Remove methods implemented in AbstractOptimizer from optimizers whenever possible.
2014-10-25 17:03:44 +02:00
a42bbf685a
Remove setIdentifier/getIdentifier from InterfaceOptimizer as it was not used.
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refs #2
2014-10-25 01:27:18 +02:00
6b05a71a86
Documenation update in statistics package.
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refs #2
2014-10-24 20:49:03 +02:00
3987cd11e2
Minor fixes.
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refs #2
2014-10-24 16:01:31 +02:00
3cdb25b393
Show modal when attempting to close EvA with CMD+Q or via menu.
2014-10-24 11:03:23 +02:00
