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• 014fd85beb Refactor EVAHELP and remove it. Fabian Becker 2014-11-12 14:35:58 +01:00
• 40df065a58 Fix the png export by simply using the FunctionArea graphics. Fabian Becker 2014-11-11 17:01:31 +01:00
• 837c4fea32 JavaDoc fixes and larger code cleanup. Fabian Becker 2014-11-11 16:58:43 +01:00
• 7c896fea8d Test tTestEqSize Fabian Becker 2014-11-11 02:00:58 +01:00
• 1af305ae3d Fix variance implementation and add tests to Math package. Fabian Becker 2014-11-10 17:46:34 +01:00
• 6386c03f43 Remove Generic from most editors. They are not generic at all. Fabian Becker 2014-11-09 18:57:50 +01:00
• 8f35b0c6d4 Rename StatisticalParameters to remove EvA in name. Fabian Becker 2014-11-09 18:50:15 +01:00
• 88ef09db21 Ensure size of population is set when target size is set. Fabian Becker 2014-11-07 23:44:34 +01:00
• 7756ceac4e Code cleanup through static analysis. Fabian Becker 2014-11-07 23:43:17 +01:00
• 453df310ee Remove crap comments. Fabian Becker 2014-11-07 22:58:41 +01:00
• d778dc6e24 Make Population a typed ArrayList Fabian Becker 2014-11-07 22:45:06 +01:00
• 1dedb13dc9 Fix bug in humaniseCamelCase. Fabian Becker 2014-11-07 21:59:28 +01:00
• 7605dacb8a CLI adjustments Fabian Becker 2014-11-06 15:54:57 +01:00
• 3358a469a3 Fix bug in PSO implementation. Fabian Becker 2014-11-06 11:27:32 +01:00
• b7749711ca Remove last uses of SelectedTag from core package Fabian Becker 2014-11-06 10:24:51 +01:00
• 1b8b77c52f Remove SelectedTag in StatisticsParameters Fabian Becker 2014-11-05 22:31:28 +01:00
• 93aff6d876 Refactor EnumEditor and actually use it. Fabian Becker 2014-11-05 20:00:00 +01:00
• 62e436274c Removed SelectedTag from ScatterSearch. Fabian Becker 2014-11-05 19:02:39 +01:00
• e18f9e3b38 Replace SelectedTag with useful enum. Fabian Becker 2014-11-05 18:53:47 +01:00
• a91d9fbecc Close dialogs on escape key press. Fabian Becker 2014-11-05 18:53:23 +01:00
• a3cf5971fb Remove AlgType Selected in PSO Fabian Becker 2014-11-04 23:20:15 +01:00
• 43768d1f96 Removes SelectedType where unnecessary. Fabian Becker 2014-11-04 22:54:13 +01:00
• cb89110e86 Style adjustments for MacOS Fabian Becker 2014-11-04 21:44:24 +01:00
• efe1a1188b Stuff. Fabian Becker 2014-11-04 16:33:55 +01:00
• b77cda3046 Cleaner code. Fabian Becker 2014-11-04 15:18:26 +01:00
• 049304e9c1 Removed unused classes (dating back to < 2007..) Fabian Becker 2014-11-03 18:50:35 +01:00
• a08655a60f Add load/store to configurations. Fabian Becker 2014-11-03 16:08:38 +01:00
• 70dd824d13 Remove globalInfo completely Fabian Becker 2014-11-02 19:04:17 +01:00
• 551b14fe3d Load and store Optimizations as YAML. Fabian Becker 2014-11-02 17:53:42 +01:00
• 173ebd67c6 Cleanup as well as moving TipText methods to useful @Parameter annotations. Fabian Becker 2014-11-02 16:10:57 +01:00
• 6bb4616763 Added enum handling to CLI mode. Fabian Becker 2014-11-02 16:10:44 +01:00
• 83ee77f5af Simplify appendArrays method to use generic type. Fabian Becker 2014-11-02 15:33:56 +01:00
• ea4b12efab Add snakeyaml dependency Fabian Becker 2014-11-02 14:53:40 +01:00
• 8104c9baf7 Rename more init() methods to initialize() Fabian Becker 2014-11-02 14:53:27 +01:00
• 97d79612c2 Merge branch '30-dynamic-cli' Fabian Becker 2014-11-02 14:03:59 +01:00
• edaa58bd5a Remove apache, gson, cli, reflection dependencies for slimmer EvA2 package. Fabian Becker 2014-11-02 14:03:23 +01:00
• 89402e0b05 Hide several elements from the UI Fabian Becker 2014-11-02 13:40:31 +01:00
• 29a1bb64e3 Performance Optimization in CLI mode Fabian Becker 2014-11-02 13:39:58 +01:00
• 2a2162c5da More @Parameters and a fix for empty getters. Fabian Becker 2014-11-01 18:59:28 +01:00
• ee73f5dbe5 Renamed init to initialize. Added @Parameter annotation to EAIndividual Fabian Becker 2014-11-01 18:32:21 +01:00
• 9efebe8b4b Initial commit of new dynamic CLI mode. Fabian Becker 2014-11-01 18:13:36 +01:00
• d0268527b0 Rename InterfaceStatisticsParameter to InterfaceStatisticsParameters for consistentcy with OptimizationParameters Fabian Becker 2014-11-01 18:18:58 +01:00
• d676e78f61 Few more @Parameter annotations where useful. Fabian Becker 2014-11-01 17:57:56 +01:00
• cb83280a55 Properly show TipTexts again Fabian Becker 2014-11-01 14:53:28 +01:00
• 4909cdd6bc Refactor @Parameter annotation to be applied to setter methods. Fabian Becker 2014-11-01 13:27:33 +01:00
• 032a4ce087 Added new convertToUnderscore method. Fabian Becker 2014-11-01 13:27:09 +01:00
• 9a8efc403e Move InterfacePopulationChangedEventListener to eva2.optimization.population. Fabian Becker 2014-10-31 19:05:38 +01:00
• c8de290e4c Random refactoring to make EvA2Problems work again. Fabian Becker 2014-10-31 18:36:15 +01:00
• 3ac628e85f Rename init method to initialize and fix a bug for SBMLsimulator interop Fabian Becker 2014-10-31 15:21:13 +01:00
• ba814ec492 Remove hostname from Main Fabian Becker 2014-10-31 10:54:51 +01:00
• 802a36eb60 Consistently have a white background in propertypanel Fabian Becker 2014-10-31 00:34:55 +01:00
• 4db79c69d2 Remove a huge chunk of globalInfo methods. Fabian Becker 2014-10-31 00:29:22 +01:00
• 0b35a9e880 Fixes sidebar issue with content disappearing. Fabian Becker 2014-10-30 18:42:16 +01:00
• b9e43e1174 Fix GUI hidden properties (setProblem) in Optimizers Fabian Becker 2014-10-30 16:27:35 +01:00
• 6465afb3e9 New MaximumTimeTerminator Fabian Becker 2014-10-29 23:10:47 +01:00
• 079715bb24 Fix globalInfo/annotations. Fabian Becker 2014-10-29 22:36:10 +01:00
• 0202692844 Various bugfixes. Fabian Becker 2014-10-29 17:42:44 +01:00
• 668dcb6974 New @Hidden annotation to permanently hide properties from the UI. Fabian Becker 2014-10-28 20:35:35 +01:00
• 24597ad01b Hide properties from Population. Fabian Becker 2014-10-28 19:04:57 +01:00
• 3a3ebc502b Cleanup. Fabian Becker 2014-10-28 18:53:52 +01:00
• 90f006a239 Hide problem in optimizers Fabian Becker 2014-10-28 18:16:15 +01:00
• f752f2bcc6 Update pom.xml Fabian Becker 2014-10-27 20:39:11 +01:00
• d170727f8e Small bugfix for setting the problemDimension. Fabian Becker 2014-10-27 20:36:23 +01:00
• f43e575b18 Abstract getProblemDimension into InterfaceOptimizationProblem Fabian Becker 2014-10-27 15:54:16 +01:00
• 5799e6bdd2 Rename method in EvAStatisticalEvaluation to what it actually does. Fabian Becker 2014-10-27 15:16:52 +01:00
• adc5f58133 Some corrections to ABC. More cleanup. Fabian Becker 2014-10-27 09:46:59 +01:00
• 3a02431d25 Remove ANT files. Fabian Becker 2014-10-26 20:24:17 +01:00
• adc0d74bf7 Rename AbstractEAIndividualComparator to EAIndividualComparator as it is not abstract. Fabian Becker 2014-10-26 19:40:55 +01:00
• a8320cad76 Implements ABC algorithm Fabian Becker 2014-10-26 17:08:37 +01:00
• 5bd11e4624 Small cleanup and better documentation. Fabian Becker 2014-10-26 17:08:01 +01:00
• ca30e6c705 Start of implementation for AdaptiveDE Fabian Becker 2014-10-23 17:51:13 +02:00
• 2ae2a17cfe Introduce new AbstractOptimizer Fabian Becker 2014-10-25 02:27:07 +02:00
• a42bbf685a Remove setIdentifier/getIdentifier from InterfaceOptimizer as it was not used. Fabian Becker 2014-10-25 01:27:18 +02:00
• 6b05a71a86 Documenation update in statistics package. Fabian Becker 2014-10-24 20:49:03 +02:00
• 3987cd11e2 Minor fixes. Fabian Becker 2014-10-24 16:01:31 +02:00
• 3cdb25b393 Show modal when attempting to close EvA with CMD+Q or via menu. Fabian Becker 2014-10-24 11:03:23 +02:00
• cb5bedd263 Clean up statistics code Fabian Becker 2014-10-24 10:58:44 +02:00
• 6694465ba1 New Logo, new Icon. Fabian Becker 2014-10-23 20:29:32 +02:00
• 15e5efb2a0 Fix ToolTip not appearing on front sheet panel. Fabian Becker 2014-10-23 17:50:12 +02:00
• 468aa7b2a0 Fix ToolTip not appearing on front sheet panel. Fabian Becker 2014-10-23 17:50:12 +02:00
• 2593ec2a70 Properly show ToolTipText on the PropertySheetPanel. Fix missing HTML for OptimizationParameters. Clean up PropertySheetPanel. Fabian Becker 2014-10-23 17:11:49 +02:00
• b13e81e59c Cleanup and documentation update. Fabian Becker 2014-10-23 13:53:52 +02:00
• c7bf4dd7e2 Merge branch 'master' of gitlab.cs.uni-tuebingen.de:eva2/eva2 Fabian Becker 2014-10-23 11:52:08 +02:00
• cb5c709f4b More general cleanup. Fabian Becker 2014-10-22 21:19:57 +02:00
• df420a06c8 More general cleanup. Fabian Becker 2014-10-22 21:19:57 +02:00
• 945889dcaf Refactoring foo Fabian Becker 2014-10-22 17:32:41 +02:00
• 117284ace5 Fix package names in MatlabInterface Fabian Becker 2014-10-22 16:21:08 +02:00
• c93b3ae0ff Further code cleanup Fabian Becker 2014-10-21 22:47:29 +02:00
• 857fd35977 ModuleAdapter refactor Fabian Becker 2014-10-21 20:18:43 +02:00
• 0eaddb26ef Update copyright Fabian Becker 2014-10-21 18:50:11 +02:00
• 12c7db9251 Remove old config values Fabian Becker 2014-10-21 18:49:44 +02:00
• f5e71dbd36 Fix classpath bug introduced with performance op. Fabian Becker 2014-10-21 09:40:45 +02:00
• 10aaaa37c0 Several style fixes. Fabian Becker 2014-10-20 22:11:05 +02:00
• 57f4d35c46 Improve performance^10 by ignoring all JARs that don't have the EvA substring. Fabian Becker 2014-10-20 19:18:27 +02:00
• b7b88f4415 Improve performance by limiting the amount of lines in the Optimization Log Fabian Becker 2014-10-20 18:18:23 +02:00
• 0a7907f3f6 Add left padding to PropertySheetPanel JTable. Fabian Becker 2014-10-19 20:10:30 +02:00
• d5f1a9eeee Dialogs now open up relative to the parent window. Fabian Becker 2014-10-19 20:01:01 +02:00
• 9ce4f3e130 Update EvA2Doc - Remove .aux files - Change .gitignore to ignore generated LaTeX files Fabian Becker 2014-10-19 19:39:58 +02:00
• 75211cb769 More cleanup. Fabian Becker 2014-10-19 19:08:48 +02:00
• 2cd764776a Prevent internal frames from getting minified as it causes issues on Mac. Fabian Becker 2014-10-19 16:29:11 +02:00